Aspergillus nidulans Chromosome VII - Version 2 - Aligned with Genetic Map - 123 Probe Pools
MINIMAL MAP
Estimated Coverage = 100%
Estimated Physical Size = 4240 kb
KB LOCUS CLONE/CHR CLONE 10 20 30 40 50 60 70 80 90 100 110 120
HYBR. NAME .........|......|...|.........|.........|.........|.........|.........||.........|........|.||.........|.........|.........|...
12345678 -------------------------------------------------------------------------------------------------------------------------------
|-0 M * SL18BO5 1...............|.....................................................|...................|.|..................................
| M SW18FO2 11..............|.....................................................|...................|.|..................................
|-50 alcC L * SWO3B11 .1..............|.....................................................|...................|.|..................................
| alcAR MHMLHMM RW12F1O .11.............|.....................................................|...................|.|.....................1............
|-100 H * SLO8E11 ..1.............|.....................................................|...................|.|..................................
| MMHH HML RW16BO2 ..11............|.....................................................|...................|.|..................................
| M * SW21D12 ...11...........|.....................................................|...................|.|..................................
|-150 H * SL1OFO2 ....1...........|.....................................................|...................|.|..................................
| H SW12G1O ....11..........|.....................................................|...................|.|..................................
|-200 H * SLO9HO3 .....1..........|.....................................................|...................|.|..................................
| HL RL12H1O .....11.........|...1.................................................|1..................|.|.....................1............
| H * SL1OH1O ......11........|.....................................................|...................|.|..................................
| H * SL3OG11 .......1........|.....................................................|...................|.|..................................
| M * SL19A11 .......11.......|.....................................................|...................|.|..................................
|-250 L * SLO8CO1 ........11......|.............................................1.......|...................|.|..................................
| LM RWO8EO4 1........11....1|..11.1.1.....11.11......11...1......................1|.11.1..............|.|......1111...................1....
| ML RL15CO6-d ..........1.....|.....................................................|...................|.|..................................
| cen HMHHHMMH OW14AO2 .......11.11...1|.......1......1..11.............1....................|...................|.|11....................1...........
|-300 H * SW18C11 ...........1....|.....................................................|...................|.|..................................
| M SW17GO5 ...........11...|.....................................................|...................|.|..................................
| H * SW1ODO5 ............11..|.....................................................|...................|.|..................................
|-350 M * SL26E11 .............1..|.....................................................|...................|.|..................................
| L SW11GO6 ...1.........11.|.....................................................|...................|.|..................................
| M * SW3OFO7 ..............1.|.....................................................|...................|.|..................................
|-400 H * SWO7H1O ..............11|.....................................................|...................|.|..................................
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|-0 M * SW17DO7 ................|1....................................................|...................|.|..................................
| M SW22DO9 ................|11...................................................|...................|.|..................................
|-50 M * SLO4E11 ................|.1...................................................|...................|.|..................................
| M SWO7HO6 ...1....1.......|111..........1..1...1......1...1......1......1.......|1111...............|.|.........................11.......
|-100 M * SL29DO2 ................|..1..................................................|...................|.|..................................
| MLMMHMMM OL18A11 ................|..11.................................................|...................|.|..................................
|-150 H * SW31DO2 ................|...1.................................................|...................|.|..................................
| L L LH RW21DO6 ................|...11................................................|...............1...|.|..................................
|-200 CEN L * SW11AO9 ................|....1................................................|...................|.|..................................
| cen MMHMHHLM OW18FO3 ................|.1.111...............................................|...................|.|....................1...1.........
|-250 H * SLO6F12 ................|.....1........1......................................|...................|.|..................................
| M SWO9AO3 ................|.....11..............................................|...................|.|..................................
|-300 L * SW26BO8 ................|......1..............................................|...................|.|..................................
| M LHL RW28E1O ................|......111............................................|...................|.|..................................
|-350 L * SWO3FO5 ................|.......1.............................................|...................|.|..................................
| LLHMM RL25F11 ................|.......11............................................|...................|.|..................................
|-400 M * SL26C12 ................|........1............................................|...................|.|..................................
| H SL14G1O ................|........111..........................................|...................|.|..................................
| M * SL3OBO9 ................|.........1...........................................|...................|.|..................................
|-450 M * SLO8DO1 ................|.........11..........................................|...................|.|..................................
| HL RW13BO7 ............11..|..........111.........1..............................|..............11...|.|..................................
|-500 M * SL1OHO9 ................|...........1.........................................|...................|.|........................1.........
| M SWO9HO3 ................|...........111.......................................|...................|.|..................................
| H * SL15HO2 ................|............11.....................111...............|...................|.|..................................
|-550 M * SWO1A11 ................|.............1.......................................|.....1.............|.|..................................
| M L RWO8DO5 ................|.............11.........1...........1................|........1......1...|.|......................1......1....
|-600 M * SLO3B11 ................|..............1......................................|...................|.|..................................
| L SL11AO7 ................|..............11.....................................|.............1.....|.|..............1............1......
|-650 L * SWO4B11 ................|...............111...................................|...................|.|..................................
| HL RW28BO8 ................|...............111...................................|...................|.|..................................
|-700 M * SW17DO9 ................|.................1...................................|...................|.|..................................
| M SW17CO5 ................|.................1111................................|...................|.|..................................
|-750 M * SL22E1O ................|..................1..................................|...................|.|..................................
| H SL21FO6 ................|..................11.................................|...................|.|..................................
|-800 M * SWO2DO4 ................|...................1.................................|...................|.|..................................
| L L L RW28FO5 ................|...................11................................|...................|.|................................1.
| M * SL32B11 ................|..................1.1................................|...................|.|..................................
|-850 H * SLO6EO8 ................|....................11...............................|...................|.|..................................
| MLLML HM RW16G12 ................|..........11.........11..............................|.............111...|.|..................................
|-900 M * SLO3BO7 ................|......................1..............................|...................|.|..................................
| M HLHHHM RL12F11 ................|......................11...............1.............|...................|.|..................................
|-950 M * SL25EO8 ................|.......................1.............................|...................|.|..................................
| L SW1OHO5 ................|.......................11............................|.................1.|.|..................................
|-1000 M * SLO7FO6 ................|........................1............................|...................|.|..................................
| L SW23GO9 ................|.......................111...........................|...................|.|..................................
|-1050 M * SL26F11 ................|.........................11..........................|...................|.|..................................
| M SW12BO7 ................|.........................11..........................|...................|.|..................................
| M * SL14EO2 ................|..........................1..........................|...................|.|..................................
|-1100 H * SWO7E1O ................|..........................1111.......................|...................|.|..................................
| M SWO2DO7 ................|...........................11........................|...................|.|..................................
| H * SL15FO7 ................|............................11.......................|...................|.|..................................
|-1150 M * SW26A1O ................|............................11.......................|...................|.|..................................
| HLH HMM RW19G12 ..............1.|................1.........1..111.1................1..|.........1...11....|.|..................................
|-1200 (chsE) M * SW26A11 ................|..............................1......................|...................|.|..................................
| MLH MM RWO2BO2 ...........1...1|..............................111...1............1...|...................|.|11......1.............1...........
|-1250 H * SW28DO9 ................|...............................1.1...................|...................|.|..................................
| ML M ML RWO7A11 ................|...............................11....................|...................|.|..................................
|-1300 M * SW1OGO7 ................|................................1....................|...................|.|......1...........................
| M SW11EO9 ................|................................11...................|...................|.|..................................
|-1350 H * SW1ODO3 ................|.................................1...................|...................|.|..................................
| L SW28F12 ................|.................................111.1.........1.....|...................|.|..................................
| H * SLO9E1O ................|..................................11.................|...................|.|..................................
| M * SL21DO2 ................|...................................1.................|...................|.|..................................
|-1400 M * SL32GO1 ................|...................................11................|...................|.|..................................
| L L LL RLO6HO2 ................|...................................111...............|...................|.|..................................
|-1450 M * SL21C11 ................|...................................1.1...............|...................|.|..................................
| H SL12HO8 ................|.....................................11..............|...................|.|..................................
| M * SWO2G12 ................|......................................11.............|...................|.|..................................
| M * SL31FO7 ................|.......................................1.............|...................|.|..................................
|-1500 M * SW14AO6 ................|.......................................11............|...................|.|..................................
| MH RLO9DO5 ................|.......................................111...........|...............1...|.|........1.........................
|-1550 M * SWO9CO2 ................|.........................................1...........|...................|.|..................................
| M M RL28E1O ................|.........................................111.........|...................|.|..................................
|-1600 H * SWO3GO2 ................|..........................................1..........|...................|.|.........................1........
| L H MMM RL18FO3 ................|..........................................11.........|...................|.|..................................
| M * SWO1HO9 ................|...........................................11........|...................|.|...........................1......
|-1650 M * SLO9DO6 ................|............................................1........|...................|.|..................................
| HMMMML RW15BO7 ................|.....1......................................11.......|.1.................|.|..................................
|-1700 H * SLO8G12 ................|.............................................1.......|...................|.|..................................
| H SW28G1O ................|.............1...............................11......|...1...............|.|..................................
|-1750 M * SWO9AO6 ................|.............................................11......|...................|.|..................................
| H SW16EO5 ................|............11..1.............................11.....|...................|.|..................................
| MH RW25HO3 ................|..................1............................11....|...................|.|..........................1.......
|-1800 M * SW14DO2 ................|................................................1....|...................|.|..................................
| H SLO9CO4 .............1..|.......................................1........11...|.....1.............|.|.................................1
|-1850 calmodulin M * SL28AO7 ................|.................................................1...|...................|.|..................................
| L SWO3GO5 ................|.................................................11..|.1.................|.|..................................
| L * SW18G1O ................|..................................................1..|...................|.|..................................
|-1900 (H3) M * SWO1FO9 ................|..................................................11.|...................|.|..................................
| H M RLO5EO4 ................|...................................................11|...................|.|..............................1...
|-1950 H * SW18E12 ................|....................................................1|...................|.|..................................
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|-0 (nimO) L * SW26FO5 ................|.....................................................|1..................|.|..................................
| H MH M RL12B11 ...........1....|..........1..........................................|11..........1......|.|..................................
|-50 M * SLO8EO2 ................|.....................................................|.1.................|.|..................................
| MH L RW1OEO7 ................|.....................................................|.11...........1....|.|..................................
| wetA H * SL2OF11 ................|.....................................................|..11...............|.|..................................
|-100 wetA L * SLO7CO3 ................|.....................................................|...1...............|.|..................................
| HL RW29BO6 ...............1|.....................................................|...11..............|.|......1........1..................
|-150 H * SWO6FO1 ................|.....................................................|....1..............|.|..................................
| HL RW27C1O ....1...........|...11............11........1.1.....11................|.1.111.............|.|.1...11.1.............11..11......
| LM LM RW22GO9 1......1........|...1..1.......1..11........1.111....1................|...1111............|.|1.......11........................
| H * SW11D12 ................|.....................................................|......111..........|.|..................................
| H * SW26EO3 ................|.....................................................|.......1...........|.|..................................
|-200 L * SW26GO2 ................|.....................................................|.......11..........|.|..................................
| HMHHHL RWO5FO8 ................|.....................................................|........11.........|.|..................................
|-250 H * SW31B11 ................|.....................................................|.........1..1......|.|..................................
| H SW1OA12 ................|.....................................................|.........11........|.|........................1.........
|-300 H * SW11EO3 ................|.....................................................|..........1........|.|..................................
| M HL RW12CO3 ................|.....................................................|..........11.......|.|..................................
|-350 palF,(pCAN26) M * SWO2GO8 ................|....1................................................|...........1.......|.|..................................
| HM M RLO9FO7 ................|.....................................................|...........11......|.|..................................
|-400 nimU L * SWO4FO1 ................|.....................................................|............1......|.|..................................
| HHHHHHL RW27H1O ..1.............|.....................................................|............11.....|.|.......................1..........
| L SW13AO8 ................|.....................................................|.............11....|.|................1.................
| MMH MMLM RW13A1O ................|..........111...............................1........|..............11...|.|..................................
|-450 M * SL19H11 ................|.....................................................|..............1....|.|.......................1..........
| H SLO4BO9 ................|...........1...................1.1...................|..............11...|.|..................................
| M * SL21F11 .....1..........|........1............................................|...............11..|.|..................................
|-500 H * SW31D1O ................|.....................................................|................1..|.|..................................
| M SWO9EO3 ................|.....................................................|................111|.|..................................
| H * SWO5A12 ................|.....................................................|.................11|.|..................................
|-550 M * SL31HO1 ................|.....................................................|.................11|.|..................................
| LL RL1OAO6 ................|.....................................................|..................1|.|..................................
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|-0 M * SLO5B12 ................|.....................................................|...................|1|..................................
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|-0 M * SL26GO9 ................|..................................1..................|...................|.|1.................................
| MMH MH RW12H11 .1.............1|....1..1.........11.....11...........................|...................|.|11................................
|-50 H * SL25FO5 ................|.....................................................|...................|.|.1................................
| L SW27CO8 ................|.....................................................|...................|.|.11...............................
|-100 H * SWO7EO5 ................|.....................................................|...................|.|..1...............................
| M SW18A11 ................|.................................................1...|...................|.|..11..............................
| gatA L * SL18EO2 ................|.....................................................|...................|.|...1..............................
|-150 alcC H * SWO3AO3 ................|.....................................................|...................|.|...11.............................
| M SLO7HO5 ................|.....................................................|...................|.|....11............................
|-200 M * SWO4D11 ................|.....................................................|...................|.|.....1............................
| M M RW21BO3 ................|.....................................................|...................|.|.....11...........................
| L * SW11AO2 ................|.....................................................|...................|.|......1...........................
|-250 H * SWO8BO4 ................|.....................................................|...................|.|......11..........................
| H H L RL14AO4 ................|..........1.....1......1................1............|...................|.|.......11.........................
|-300 M * SL3OAO4 ................|.....................................................|...................|.|........1.........................
| M SWO1DO2-d ....1.........11|..............................1............1.........|...................|.|.......111..............11........
|-350 L * SWO2D12 ................|.....................................................|...................|.|.........1........................
| L SW26FO7 ................|..........................1..........................|...................|.|.........11.......................
|-400 H * SW3OAO1 ................|.....................................................|...................|.|..........1.......................
| M SW1OH1O ................|.....................................................|...................|.|..........11......................
|-450 M * SWO1BO2 ..1.............|.................................................1...|...................|.|...........1......................
| HH RL32DO9 ................|........1............................................|...................|.|...........11.....................
| M * SL29GO2 ................|.....................................................|...................|.|............1.....................
|-500 M * SL28B12 ................|.................1...................................|...................|.|............11....................
| M HM RL31GO8 ..1.....1.......|.......1...1.........11111.............1.............|...................|.|1...........11111.............1...
|-550 M * SL17C11 ................|....................................1................|...................|.|..............1...................
| M HM RL31GO8-d ..1.....1.......|.......1...1.........11111.............1.............|...................|.|1...........11111.............1...
|-600 L * SWO1FO2 ................|.....................................................|...................|.|......1........1..................
| HLHMHL RW16EO6 111.............|1............11.11111.........1........11............|........1..........|.|........1......11......1..1......1
| H * SW13BO8 ................|.....................................................|...................|.|................1.................
|-650 H * SL31BO4 ................|.....................................................|...................|.|................11................
| M ML RW28CO3 ........1.1.....|11......1....11............1...11...111.11.1..1...111|1..1...............|.|.1.....1111......11..111111.1..11.
| L SLO9GO5 ................|.....................................................|...................|.|..................1...............
| M M RW17G11 ................|.............................11......................|...................|.|..................11..............
|-700 M * SL2OB12 ................|.....................................................|...................|.|...................1..............
| M SWO2A11 ................|.....................................................|...................|.|...................11.............
|-750 M * SL27HO3 ................|.....................................................|...................|.|....................1.............
| H SL11F12 ................|.....................................................|...................|.|....................11............
|-800 H * SL26BO6 ................|.....................................................|...................|.|.....................1............
| M SL28HO5 ................|.....................................................|...................|.|.....................11...........
|-850 H * SW28D11 ................|.....................................................|...................|.|......................1...........
| LL M RW13D1O ................|............1........................1...............|...................|.|......................11..........
|-900 H * SWO6BO7 ................|.....................................................|...................|.|.......................1..........
| M SWO6HO8 ................|.....................................................|...................|.|.......................11.........
|-950 M * SWO9HO6 ................|.....................................................|...................|.|........................1.........
| M SWO1DO2 ....1.........11|..............................1............1.........|...................|.|.......111..............11........
|-1000 M * SL15AO5 ..............1.|.....................................................|...................|.|.........................1........
| MM RW17DO5 ................|......1............1.................................|1..................|.|.........................11.......
| M * SWO3HO9 ................|.....................................................|...................|.|..........................11......
|-1050 H * SL3OG1O ................|.....................................................|...................|.|...........................1......
| M SL23HO6 ................|.....................................................|...................|.|...........................11.....
|-1100 H * SW13DO8 ................|.....................................................|...................|.|............................1.....
| L SW18FO1 ................|.....................................................|...................|.|............................11....
|-1150 M * SW26HO3 ................|.....................................................|...................|.|.............................1....
| L SW28GO5 ................|.....................................................|...................|.|.............................111..
|-1200 M * SLO4E1O ................|.....................................................|...................|.|..............................11..
| LHH RL19F1O ................|..................1.1................................|...................|.|...............................11.
|-1250 L * SLO8BO1 ................|....................1................................|...................|.|................................1.
| LM RL26CO1 ................|.1...................................................|...................|.|................................11
|-1300 M * SLO3B1O ................|.....................................................|...................|.|.................................1
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In the first column a scale in kilobases (kb) is provided for the chromosome walk. The chromosome walk above is aligned with the genetic map.
In the second column Genetic loci assigned to cosmids are found. Cosmids, which hybridize to another complementing
clone or to a clone, which hybridizes to a gene probe, are given in parantheses. The parantheses
around the locus name implies that the cosmid listed by name in the same row has not been
shown to complement directly a mutation at the genetic locus or hybridize directly to a gene probe.
CEN denotes the predicted location of the centromere, while cen in lowercase denotes a centromeric repeat.
In the third column hybridization of the clone to each chromosome is scored as high (H), medium (M), or low (L).
In the fourth column the star (*) denotes that the cosmid was used as a probe.
In the fifth column is the clone name.
NOTES ON THE PHYSICAL MAP:
2 breaks were introduced into the physical map to align the physical and genetic maps.