Aspergillus nidulans Chromosome II - Version 2 - Aligned with Genetic Map - 105 Probe Pools
MINIMAL MAP
Estimated Coverage = 80%
Estimated Physical Size = 3350 kb
KB LOCUS CLONE/CHR CLONE 10 20 30 40 50 60 70 80 90 100
HYBR. NAME .........|.........|.....|....|.........|.........|...|......|.........|.........|.........|...|......|.....
12345678 ---------------------------------------------------------------------------------------------------------------------------
|-0 L * SW14BO2 1........................|............................|........................................|............
| cysB H SL21B1O 11.......................|............................|........................................|............
|-50 H * SLO5F11 .1.......................|............................|........................................|............
| MMH MH RW12H11 .11..1.....1....111......|............................|...................1..............1.....|..1.........
|-100 M * SW28BO9 ..1......................|............................|........................................|............
| cen HMHHHMMH OWO2CO4 .111.1........11.........|............................|........................................|......1.....
|-150 M * SW23BO6 ...1.....................|............................|........................................|............
| M SWO7CO4 ...111...................|............................|........................................|............
| M * SW22EO4 ....11...................|............................|........................................|............
|-200 CEN M * SWO7H11 .....1...................|............................|........................................|............
| cen HHHHHHMH OW19HO2 .....11..................|............................|........................................|............
|-250 M * SW23HO9 ......1..................|............................|........................................|............
| HHHHMML RL15CO2 ......11.................|............................|........................................|............
|-300 M * SW23CO1 .......1.................|............................|........................................|............
| MHHMH M RWO9C12 ......111................|............................|........................................|............
|-350 M * SW14E12 ........1................|............................|........................................|............
| H SLO5GO4 ........11...............|............................|........................................|............
|-400 M * SW11FO1 .........1...............|............................|........................................|............
| L L RL15B11 .........11..............|............................|........................................|............
|-450 M * SW3OGO6 ..........1..............|............................|........................................|............
| MHMLHMM RW12F1O ..........11.............|............................|....1...................................|............
|-500 M * SW21GO7 ...........1.............|............................|........................................|............
| HMMHHMM RL29GO8 ...........111...........|............................|....................................1...|............
|-550 M * SW3OGO8 ............1............|............................|........................................|............
| HMHHHL RWO5FO8 ............11...........|............................|........................................|............
| M * SW23G12 .............1...........|............................|........................................|............
| H * SLO7HO4 .............11..........|............................|........................................|............
|-600 M * SW1OF1O ..............11.........|............................|........................................|............
| MLH MM RWO2BO2 .111.11.......111........|.........................1..|......................................1.|.......11...
|-650 L * SL21FO8 ................1........|............................|........................................|............
| L L RW17HO8 ................11.......|................1...........|...........11........1..................|1......1....
|-700 L * SW18BO4 .................1.......|............................|........................................|............
| cen MHMMMHHM OW12A11 ..1........111...11......|.......1....................|...........1......1.1...................|.......1....
| LM MM L RL16C12 ..................1......|............................|........................................|............
| M MH RW13F11 ..................11.....|............1...............|...1............11.......11.............|............
|-750 H * SLO7CO2 ...................111...|............................|........................................|............
| H SL18CO3 ...................111...|............................|........................................|............
| M * SL12CO7 ....................11...|............................|........................................|............
| H * SL31DO6 .....................1...|............................|........................................|............
|-800 H * SL28G12 .....................11..|............................|........................................|............
| M M LH RW21AO4-d 1....1.1......11......111|......1.............111..1..|11...11....1111............111...11.111.|1....111111.
|-850 M * SWO3C12 .........1.............1.|............................|........................................|............
| M M LH RW21AO4 1....1.1......11......111|......1.............111..1..|11...11....1111............111...11.111.|1....111111.
|-900 L L RWO4G11 ........................1|............................|........................................|............
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|-0 H * SL21GO4 .........................|11..........................|........................................|............
| M * SW31CO9 .........................|.1..........................|........................................|............
| HM RL26EO9 ..1......................|.11.1..1....................|.....................................1..|............
|-50 H * SL14FO2 .........................|..1.........................|........................................|............
| M H RLO9HO1 .........................|.111........................|........................................|............
|-100 H * SW3OHO3 .........................|...1........................|........................................|............
| M SL11C11 .........................|...11.......................|........................................|............
|-150 L * SW12CO1 .........................|....1.......................|........................................|............
| MLM RL12AO2 .........................|....11.....1................|........................................|......1.....
|-200 L * SWO9D1O .........................|.....1......................|........................................|............
| M H RLO9BO5 .........................|.....11.....................|........................................|............
|-250 M * SW11CO2 .........................|......1.....................|........................................|............
| H SL12BO5 .........................|......11....................|........................................|............
| H * SL13AO3 .........................|.......11...................|........................................|............
|-300 H * SL13H1O .........................|.......11...................|........................................|............
| HM M RLO9FO7 .........................|........11..................|........................................|............
|-350 M * SWO7HO4 .........................|.........1..................|........................................|............
| M H RL21BO8 ..1......................|.........111................|........................................|............
| M * SWO4A12 .........................|..........1.................|........................................|............
|-400 H * SL22DO7 .....................1...|..........11................|........................................|............
| MHHLH L RW13FO5 .........................|1..........11...............|........................................|............
|-450 H * SL2OAO3 .........................|............1...............|.......................1................|............
| MLHMHL RWO2F1O .....1...................|............11............1.|........................................|............
|-500 M * SL15CO4 .........................|.............1..............|........................................|............
| M SWO1F11 .........................|.....1.....1.11.............|.......................1................|............
| L SLO8BO2 ....................1....|..............111...11......|........................................|............
| H * SL3OF12 .........................|...............1............|........................................|............
|-550 H * SW21GO2 .........................|...............11...1.......|........................................|............
| H SL23AO9 .........................|................11..........|........................................|............
| H * SL25BO2 .........................|.................11.1.......|........................................|............
|-600 L * SW31E1O .........................|..................1.........|........................................|............
| M SLO4AO5 .........................|.................111........|........................................|............
| L * SW23HO6 .........................|...................11.......|........................................|............
| H * SL12DO1 .........................|....................11......|........................................|............
| M * SL27EO7 .........................|.....................1......|........................................|............
|-650 M * SL23CO8 .........................|.....................11.....|........................................|............
| L SW15EO3 ..1.......1..............|......111....11......111....|............111....11...1...11.1...1111.|.....111....
|-700 M * SWO5D12 .........................|.......................1....|........................................|............
| M SW29CO3 ..............1..........|.............1........111...|..1.......1............1............1...|............
|-750 H * SL26DO1 .........................|........................1...|........................................|............
| M SW27HO9 .......1.................|........................11..|........................................|............
| M * SL25A12 .........................|.........................1..|........................................|............
|-800 M * SW17FO8 .........................|.........................11.|........................................|............
| MH L RW1OEO7 .........................|............1.............11|........................................|............
|-850 L * SWO6GO7 .........................|...........................1|........................................|............
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|-0 L * SW3OD12 .........................|............................|1.......................................|............
| L SW28B12 .........................|............................|11......................................|............
|-50 H * SW27H12 .........................|............................|.1......................................|............
| M SWO8GO5 .........................|............................|.111....................................|............
| M * SWO9DO6 .........................|............................|..1.....................................|............
|-100 H * SLO5EO9 .........................|............................|.111....................................|............
| M SW1ODO6 .........................|............................|..11....................................|............
| L SW3OG11 .........................|............................|...11...................................|............
|-150 H * SLO8EO7 .........................|............................|....1...................................|............
| HLL MM RW27DO1 .........................|............................|....11..................................|............
|-200 L * SWO9E12 .........................|............................|.....11.................................|............
| HM RLO8H1O .........................|............................|......11................................|............
|-250 (nimE) M * SW21E1O .........................|............................|.......1................................|............
| M H RL27HO9 .........................|............................|.......11...............................|............
|-300 M * SL25BO7 .........................|............................|........1...............................|............
| LH H RW15HO4 .........................|1.......1...................|........11..............................|............
| L * SW12FO4 ....................1....|............................|.........11.............................|............
| H * SL17BO4 .........................|............................|..........11............................|............
|-350 M * SW12B11 .........................|............................|..........11............................|............
| L SWO1DO3 .........................|............1...............|..1........11...........................|.........1..
|-400 H * SLO4GO9 .........................|..............1.............|............1...........................|............
| M L RWO8DO5 .............111..1......|...........1................|............11..........................|............
|-450 H * SL19DO7 .........................|............................|.............1..........................|............
| ML RWO7HO7 ....1....................|............................|.............11.........................|............
| H * SL18DO2 .........................|............................|..............1.........................|............
|-500 M * SL17G11 .........................|............................|..............11........................|............
| LH RLO6G12 ...........1............1|..............1.............|..............111......1................|............
|-550 H * SLO8GO4 .........................|............................|..............1.1.......................|............
| MMH MMLM RW13A1O .........................|...........11...............|........1......111......................|............
| H * SL13EO1 .........................|............................|.................111....................|............
| M * SW1OEO1 .........................|............................|..................11....................|............
|-600 H * SL2OAO1 .........................|............................|...................1....................|............
| MLMHHLH RL19AO6 ....11...................|............................|...................11...................|............
|-650 M * SL16D1O .........................|............................|....................1...................|............
| MLMMHMMM OL18A11 .....1...................|............................|....................11..................|............
| H H RL28H1O .........................|............................|.....................1..................|............
| LML HL M RW26AO8 ....11...................|............................|....................111.................|............
|-700 H * SL32FO9 .........................|............................|......................1................1|............
| H SL11B1O .........................|............................|......................11................|............
|-750 M * SL15EO3 .........................|............................|.......................1................|............
| M SW21C12 .........................|............................|.......................111..............|............
|-800 H * SL31EO8 .........................|............................|........................1...............|............
| H SLO6B1O .........................|............................|........................11..............|............
| H * SLO3C12 ..1......................|............................|.........................11.............|............
| M * SL11DO8 .........................|............................|..................1.......11............|............
| M * SW16BO7 .........................|............................|...........................11...........|............
| L * SW16A12 .........................|............................|............................1.1.........|............
|-850 H * SLO6A11 .........................|............................|............................1...........|............
| L SW21HO5 .........................|............................|............................1111........|............
|-900 H * SL29FO6 .........................|............................|.............................111........|............
| M SL29FO8 .........................|............................|.............................1111.......|............
|-1000 (adC,adD,dewA) M * SW18BO1 .........................|............................|................................1.......|............
| cen HMHHHMMH OW14AO2 .111.11........111.......|............................|............1...................111.....|............
|-1050 L * SW29BO9 .........................|............................|.................................1......|............
| LMMH RW18CO2 ......1.............1....|....................11....1.|.........11.......1.............111...1.|.....1......
|-1100 H * SL15AO8 .........................|............................|..................................1.....|............
| M SWO7G12 .........................|............................|.....................1............11....|............
|-1150 H * SLO5CO4 .........................|............................|...................................1....|............
| HMMMHM RL11BO3 .........................|............................|...................1...............11...|............
| M * SL27DO7 ................1........|............................|....................................11..|............
|-1200 H * SL19A1O ................1........|............................|....................................11..|............
| M SLO8DO2 .........................|............................|....................................111.|............
|-1250 M * SWO9BO4 .........................|............................|....................................1.1.|............
| H SL1OA11 .........................|............................|......................................11|............
|-1300 M * SW22GO5 .........................|............................|.......................................1|............
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|-0 HLH HMM RW19G12 ............1............|............1...............|...........................1.......11.1.|11......1...
| L L RL24DO9 ...1.....................|.......11...................|........................................|.11.1.......
| M SW15FO9 .........................|............................|......................................1.|..1.........
| L L RW27GO1 .........................|............................|........................................|..11........
|-50 H * SLO5DO9 .........................|............................|............1...........................|...1........
| MMH L RWO6FO4 .........................|............................|.................1......................|...11.......
| H * SL13EO9 .........................|............................|........................................|....1.......
|-100 M * SW24DO8 .........................|............................|........................................|....11......
| MLHM M RW22GO1 .........................|............................|........................................|.....11.....
|-150 H * SL26EO4 .........................|............................|....1...................................|......1.....
| HLHMHL RW16EO6 ...........1.1...1..1....|.....................1......|....1.......111.........1...1111....1...|......111...
| M * SW13FO2 .........................|............................|........................................|.......1....
|-200 M * SL23EO9 .........................|............................|........................................|.......11...
| M SL32DO2 .........................|............................|........................................|........11..
|-250 M * SWO8F12 .........................|............................|........................................|.........1..
| M HH RW16CO5 .........................|............................|........................................|.........11.
| H * SWO9G11 .........................|............................|........................................|..........1.
|-300 M * SWO5D1O .........................|............................|........................................|..........11
| H SWO4GO3 .........................|............................|...................................1....|...........1
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In the first column a scale in kilobases (kb) is provided for the chromosome walk. The chromosome walk above is aligned with the genetic map.
In the second column Genetic loci assigned to cosmids are found. Cosmids, which hybridize to another complementing
clone or to a clone, which hybridizes to a gene probe, are given in parantheses. The parantheses
around the locus name implies that the cosmid listed by name in the same row has not been
shown to complement directly a mutation at the genetic locus or hybridize directly to a gene probe.
CEN denotes the predicted location of the centromere, while cen in lowercase denotes a centromeric repeat.
In the third column hybridization of the clone to each chromosome is scored as high (H), medium (M), or low (L).
In the fourth column the star (*) denotes that the cosmid was used as a probe.
In the fifth column is the clone name.
NOTES ON THE PHYSICAL MAP:
One break in the physical map was introduced to align the physical and genetic maps.
There is considerable uncertainty about the genetic map position of dewA, and so we have resolved
the conflict in favor of its position on the physical map.