Aspergillus nidulans Chromosome IV - Version 2 - Aligned with Genetic Map - 92 Probe Pools
MINIMAL MAP
Estimated Coverage = 96%
Estimated Physical Size = 2790 kb
KB LOCUS CLONE/CHR CLONE 10 20 30 40 50 60 70 80 90
HYBR. NAME .........|.....|....|......|...||..|.......|.......|..|......|..|.|.........|..|.|....|..|.........|..
12345678 ------------------------------------------------------------------------------------------------------
|-0 M * SW22BO6 1..............|...........|...|...|...............|.........|1.|..............|.|....|...............
| MM RLO5EO2 11.............|...........|...|...|...............|.........|..|1.............|.|....|...............
| bimD,nuv11 M * SW17FO2 .11............|...........|...|...|...............|.........|..|..............|.|....|...............
|-50 bimD M * SL31C1O ..1............|...........|...|...|...............|.........|..|..............|.|....|...............
| H SW3OB11 1.11...........|...........|...|...|1..............|.1.......|..|..............|.|....|...............
|-100 H * SWO9CO7 ...1...........|...........|...|...|...............|.........|..|..............|.|....|...............
| M SW1OCO7 ...11..........|...........|...|...|...............|.........|..|..............|.|....|...............
| L * SL11DO6 ....11.........|...........|...|...|...............|.........|..|..............|.|....|...............
|-150 H * SWO1AO9 .....1.........|...........|...|...|...............|.........|..|..............|.|....|...............
| MM RL11GO7 .....111.......|...........|...|...|...............|.........|..|..............|.|....|...............
| M * SWO3CO9 ......1........|...........|...|...|...............|.........|..|..............|.|....|...............
|-200 M * SW19CO5 ......11.......|...........|...|...|...............|.........|..|..............|.|....|...............
| M SL15GO6 .......11......|...........|...|...|...............|.........|..|..............|.|....|...............
|-250 amdX M * SWO9FO9 ........1..1...|...........|...|...|...............|.........|..|..............|.|....|...............
| H SL27FO5 ........111....|...........|...|...|...............|.........|..|..............|.|....|...............
| M * SL16BO8 .........1.....|...........|...|...|...............|.........|..|..............|.|..1.|...............
|-300 M * SL3OA1O ........111....|...........|...|...|...............|.........|..|..............|.|....|...............
| H SWO1DO9 ..........11...|...........|...|...|............1..|.........|..|...........1..|.|....|...............
|-350 H * SL25EO3 ...........1...|...........|...|...|...............|.........|..|..............|.|....|...............
| HMHMHLHH OW1OB1O ..........111..|...........|...|...|1..............|.........|..|...........1..|.|....|...............
| M * SL2OC11 ............11.|...........|...|...|...............|.........|..|..............|.|....|...............
|-400 M * SL15FO6 .............1.|...........|...|...|...............|.........|..|..............|.|....|...............
| M HLHHHM RL12F11 .............11|...........|...|...|...............|.........|..|..............|.|....|...............
|-450 H * SLO4AO1 ..............1|...........|...|...|...............|.........|..|..............|.|....|...............
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|-0 H * SW18CO9 ...............|1..........|...|...|...............|.........|..|..............|.|....|...............
| M SL2OHO7 ...............|11.........|...|...|...............|.........|..|..............|.|....|...............
|-50 (chsB) M * SWO6EO6 ...............|.1...1.....|...|...|...............|.........|..|..............|.|....|...............
| MLMLMM L RW23FO1 ...............|.11........|...|...|...............|.........|..|..............|.|....|...............
| M LM RW12EO9 ..1............|..1........|...|...|...............|.........|..|..............|.|....|...............
| H SL3OC1O .1.1..........1|..11.......|...|...|...............|.........|..|..............|.|....|...............
| M * SLO6DO2 ...............|...11......|...|...|...............|.........|..|..............|.|....|...............
|-100 M * SL25HO8 ...............|....1......|...|...|...............|.........|..|..............|.|....|...............
| LL RLO8BO8 ...............|....11.....|...|...|..........1....|.........|..|..............|.|....|...............
|-150 M * SWO8GO8 ...............|.....1.....|...|...|...............|.........|..|..............|.|....|...............
| LHHLMHLM OW23CO8 ............1..|.....11....|...|...|..1............|.........|..|..............|.|....|...............
|-200 M * SWO6AO4 ...............|......1....|...|...|...............|.........|..|..............|.|....|...............
| MHMLHMM RW12F1O ...............|..1...11...|...|...|...............|.........|..|..............|.|....|...............
| H * SL3OAO1 ...............|.......1...|...|...|...............|.........|.1|..............|.|....|...............
|-250 H * SW19BO9 ...............|.......11..|...|...|...............|.........|..|..............|.|....|...............
| HLHMHL RW16EO6 .......1.......|..1...1.111|1..|...|.............1.|.........|1.|..1...........|.|....|11..1....1.....
|-300 M * SL15F12 ...............|.........1.|...|...|...............|.........|..|..............|.|....|...............
| HLHMHL RW16EO6-d .......1.......|..1...1.111|1..|...|.............1.|.........|1.|..1...........|.|....|11..1....1.....
|-350 M * SW31CO8 ...............|..........1|...|...|...............|.........|..|..............|.|....|...............
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|-0 H * SL22H1O ...............|...........|11.|...|...............|.........|..|..............|.|....|...............
| LL RWO5CO5 ...............|...........|.11|...|...............|.........|..|..............|.|....|...............
|-50 M * SW24CO4 ...............|...........|..1|...|...............|.........|..|..............|.|....|...............
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|-0 M SW18CO4 ...............|...........|...|1..|...............|.........|..|..............|.|....|...............
| M * SL19E1O ...............|...........|...|11.|...............|.........|..|..............|.|....|...............
|-50 M * SW15AO2 ...............|...........|...|.1.|...............|.........|..|..............|.|....|...............
| M H RWO1E1O ...............|...........|1..|.11|.............1.|.......1.|..|..............|.|....|...............
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|-0 CEN L * SW28D12 ...............|...........|...|...|1..............|.........|..|..............|.|....|...............
| MLMMHMMM OL18A11 ...............|...........|...|...|11..1..........|.........|..|..............|.|....|...............
|-50 M * SLO3GO7 ...............|...........|...|...|.1.............|.........|..|..............|.|....|...............
| MLMHHLH RL19AO6 ...............|...........|...|...|111............|...1.....|..|..............|.|....|...............
|-100 M * SL32EO2 ...............|...........|...|...|..1............|.........|..|..............|.|....|...............
| MMHMH H RW23DO8 ..........1.1..|...........|...|...|1111...........|.........|..|..........1...|.|....|...............
|-150 L * SW29EO7 ...............|...........|...|...|...1...........|.........|..|..............|.|....|...............
| cen HLHLHMHH OW21DO1 ...............|...........|...|...|111111.........|.........|..|..............|.|....|...............
|-200 H * SWO5C12 ...............|...........|...|...|....1..........|.........|..|..............|.|....|...............
| cen MHMMHMMH OWO6B11 ...............|...........|...|...|111.11.........|...1.....|..|..............|.|....|...............
| M * SW14B12 ...............|...........|...|...|.....11........|.........|..|..............|.|....|...............
|-250 M * SL29BO5 ...............|...........|...|...|.....11........|.........|..|..............|.|....|...............
| H SW19G1O ...............|...........|...|...|.....1111......|.........|..|..............|.|....|...............
| M * SLO7C1O ...............|...........|...|...|.......1.......|.........|..|..............|.|....|...............
|-300 M * SWO1CO7 ...............|...........|...|...|.......11......|.........|..|............1.|.|....|...............
| MHM L RLO5BO7 ....1..........|...1.......|...|...|.1.....111.....|.........|..|..............|.|1...|....1..........
|-350 T1(IV,VIII) frA1 M * SWO2GO3 ...............|...........|...|...|.........1.....|.........|..|..............|.|....|...............
| M SW22FO5 ...............|...........|...|...|.........11....|.........|..|..............|.|....|...............
|-400 M * SWO4DO5 ...............|...........|...|...|..........1....|.........|..|..............|.|....|...............
| HLM L RWO2B11 ...............|...........|...|...|..........11...|.........|..|..............|.|....|...............
|-450 M * SL23BO1 ...............|...........|...|...|...........1...|.........|..|..............|.|....|...............
| L LL H RW18F12 ...............|...........|...|...|...........11..|.........|..|..............|.|....|...............
| M * SWO2HO3 ...............|...........|...|...|............11.|.........|..|..............|.|....|...............
|-500 M * SLO5A12 ...............|...........|...|...|.............1.|.........|..|..............|.|....|...............
| M SWO6G11 ...............|...........|...|...|.............11|.........|..|..............|.|....|...............
|-550 H * SW29HO4 ...............|...........|...|...|..............1|.........|..|..............|.|....|...............
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|-0 M SW17FO4 ...............|...........|...|...|...............|1........|..|..............|.|....|...............
| M * SL12E12 ...............|...........|...|...|...............|11.......|..|..............|.|....|...............
|-50 M * SW15AO5 ...............|...........|...|...|...............|11.......|..|..............|.|....|...............
| M SW26BO5 ...............|...........|...|...|...............|111......|..|..............|.|....|...............
| M * SL28H12 ...............|...........|...|...|...............|..1......|..|..............|.|....|...............
|-100 (nuv11) M * SWO5BO2 ...............|...........|...|...|...............|..11.....|..|..............|.|....|...............
| HMMMML RW15BO7 ...............|...........|...|...|...............|...11....|..|..............|.|....|.....11........
| H * SW18AO3 ...............|...........|...|...|...............|....1....|..|..............|.|....|...............
| M * SW16HO6 ...............|...........|...|...|...............|....1....|..|..............|.|....|...............
|-150 H * SWO3HO8 ...............|...........|...|...|...............|....11...|..|..............|.|....|...............
| H MH M RL12B11 ...............|...........|...|...|1..............|....111..|..|..............|.|1...|..............1
| MMLMHML RL18AO8 ...............|...........|...|...|...............|......11.|..|..............|.|....|...............
|-200 M * SWO7AO7 ...............|...........|...|...|...............|.......1.|..|..............|.|....|...............
| M SL13GO6 ...............|...........|...|...|...............|.......11|..|..............|.|....|...............
|-250 M * SL31EO2 ...............|...........|...|...|...............|........1|..|..............|.|....|...............
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|-0 M * SW23FO9 ...............|...........|...|...|...............|.........|1.|..............|.|....|...............
| L SW13C11 ..........11111|...1.......|...|...|...............|.........|11|...........1..|.|....|...............
|-50 H * SWO3BO2 ...............|...........|...|...|...............|.........|.1|..............|.|....|...............
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|-0 LMHH RW18EO6 ...............|...........|...|...|...............|.........|..|1.............|.|....|...............
| (stc) M * SW23BO5 ...............|...........|...|...|...............|.........|..|11............|.|....|...............
|-50 L * SW11C12 ...............|...........|...|...|...............|.........|..|.1............|.|....|...............
| MLLMH L RWO3AO7 ...........1...|...........|...|...|...............|..1......|..|.11...........|.|....|...............
|-100 M * SW3OAO6 ...............|...........|...|...|...............|.........|..|..1...........|.|....|...............
| LLH RW19FO2 ..............1|...........|...|...|...............|..1...11.|..|.111..........|.|....|...............
|-150 L * SLO7DO3 ...............|...........|...|...|...............|.........|..|...1..........|.|....|...............
| MMH MH RW12H11 ...1...........|......1....|...|...|1.1............|.........|..|...11.........|.|..1.|..1.......1....
|-200 L * SLO6GO6 ...............|...........|...|...|...............|.........|..|....1.........|.|....|...............
| cen HMHHHMMH OWO2CO4 1..............|...........|...|...|1............1.|.........|..|...111........|.|....|...............
| pyroA H * SW27EO7 ...............|...........|...|...|...............|.........|..|.....11.......|.|....|...............
| pyroA M * SW3OAO5 ...............|...........|...|...|...............|.........|..|......1.......|.|....|...............
| M * SW18AO7 ...............|...........|...|...|...............|.........|..|......11......|.|....|...............
|-250 M * SW18GO7 ...............|...........|...|...|...............|.........|..|.......11.....|.|....|...............
| H SL29A12 ...............|...........|...|...|...............|.........|..|....1...11....|.|....|...............
| ML M L RW23BO8 ...........11..|...........|...|...|...............|.........|..|.........11...|.|....|...............
| M SW19DO4 ...............|...........|...|...|...............|.........|..|.........1111.|.|....|...............
|-300 M * SL17F12 ...............|...........|...|...|...............|.........|..|...........1..|.|....|...............
| L SW22BO5 ...............|...........|...|...|...............|.........|..|...........11.|.|....|...............
|-350 M * SL11BO7 ...............|...........|...|...|...............|.........|..|............1.|.|....|...............
| M MM RWO2BO3 ............1..|...........|...|...|...............|.........|..|.....1......11|.|....|..1............
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|-0 M * SW15DO2 ...............|...........|...|...|...............|.........|..|..............|1|....|...............
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|-0 M * SL13EO2 ...............|...........|...|...|...............|.........|..|..............|.|1...|...............
| M SW15C12 ..........1....|...........|...|...|...............|.........|..|..............|.|11..|.........1.....
|-50 M * SL31GO7 ...............|...........|...|...|...............|.........|..|..............|.|.1..|...............
| LL M RW3OAO7 ...............|...........|...|...|...............|.........|..|..............|.|.11.|...............
|-100 M * SL25FO3 ...............|...........|...|...|...............|.........|..|..............|.|..1.|...............
| M SL2OAO4 .........1.....|...........|...|...|...............|.........|..|..............|.|..11|...............
|-150 H * SWO4FO9 ...............|...........|...|...|...............|.........|..|..............|.|...1|...............
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|-0 L * SW11B12 ...............|...........|...|...|...............|.........|..|..............|.|....|1..............
| L H RW25CO4 ...............|...........|...|...|.............1.|1..1.....|..|.1...1.1......|.|....|111.........1..
|-50 M * SW28BO3 ...............|...........|...|...|...............|.........|..|..............|.|....|.1.1111........
| M SL23FO9 ...............|...........|...|...|...............|.........|..|..............|.|....|.11111.......1.
|-100 H * SL25BO1 ...............|...........|...|...|...............|.........|..|..............|.|....|..111..........
| M SL18BO2 ...............|...........|...|...|...............|.........|..|..............|.|....|..1111......1..
|-150 M * SW15F1O ...............|...........|...|...|...............|.........|..|..............|.|....|....11.........
| H L SL32C12 ...............|...........|...|...|........1......|.........|..|..............|.|....|.....111.......
|-200 tubB H * SW31BO1 ...............|...........|...|...|...............|.........|..|..............|.|....|......1........
| M SL15DO4 ...............|...........|...|...|...1...........|.........|..|..............|.|....|......11.......
|-250 M * SWO5DO7 ...............|...........|...|...|...............|......1..|..|..............|.|....|.......1.......
| L SW23CO7 ...............|...........|...|...|...............|.........|..|..............|.|....|.......11......
|-300 H * SL23A11 ...............|...........|...|...|...............|.........|..|..............|.|....|........1......
| M MHMMM RL13E12 ...............|...........|...|...|...............|.........|..|..............|.|....|........11.....
|-350 cen H * SW31DO9 ...............|...........|...|...|...............|.........|..|..............|.|....|.........1.....
| HMM MMM RW23B12 ...............|...........|...|...|...............|.........|..|..............|.|....|.........11....
|-400 M * SWO5F11 ...............|...........|...|...|...............|.........|..|..............|.|....|..........1....
| LMM M L RW23CO9 ...............|...........|...|...|...............|.........|..|..............|.|....|.........111...
|-450 apsA M * SW25CO5 ...............|...........|...|...|...............|.........|..|..............|.|....|...........1...
| LH L RW19HO9 .........1.....|...........|...|...|...............|.........|..|.....1........|.|....|...........11..
| M * SWO9D11 ...............|...........|...|...|...............|.........|..|..............|.|....|............1..
|-500 M * SW15GO6 ...............|...........|...|...|...............|.........|..|...1..........|.|....|.............11
| L SWO3CO2 ...............|...........|...|...|...............|.........|..|..............|.|....|..............1
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In the first column a scale in kilobases (kb) is provided for the chromosome walk. The chromosome walk above is aligned with the genetic map.
In the second column Genetic loci assigned to cosmids are found. Cosmids, which hybridize to another complementing
clone or to a clone, which hybridizes to a gene probe, are given in parantheses. The parantheses
around the locus name implies that the cosmid listed by name in the same row has not been
shown to complement directly a mutation at the genetic locus or hybridize directly to a gene probe.
CEN denotes the predicted location of the centromere, while cen in lowercase denotes a centromeric repeat.
In the third column hybridization of the clone to each chromosome is scored as high (H), medium (M), or low (L).
In the fourth column the star (*) denotes that the cosmid was used as a probe.
In the fifth column is the clone name.
NOTES ON THE PHYSICAL MAP:
4 breaks were introduced into the physical map to align the physical and genetic maps.
L and R clones mixed together are probably misplaced on the map and other positives should be considered in moving them.