Aspergillus nidulans Chromosome VIII - Version 2 - Aligned with Genetic Map - 124 Probe Pools
MINIMAL MAP
Estimated Coverage = 88%
Estimated Physical Size = 4390 kb
KB LOCUS CLONE/CHR CLONE 10 20 30 40 50 60 70 80 90 100 110 120
HYBR. NAME ........|.|......|...|......|.|..|.........|.........|......|...|.........|...|......|.........|.........|.........|.......|..|....
12345678 -----------------------------------------------------------------------------------------------------------------------------------
|-0 CEN H * SL21HO2 1.......|........|..........|.|.............................|.................|............................................|.......
| M MLHLHM RL28DO8 11....1.|........|..........|.|.............................|.................|............................................|.......
|-50 (benA) M * SW31EO1 .1......|........|..........|.|.............................|.................|............................................|.......
| M SL11FO6 .11.....|........|..........|.|.............................|.................|...........................................1|.......
|-100 tubA H * SW19FO8 ..1.....|........|..........|.|.............................|.................|............................................|.......
| L SW11FO5 ..11....|.1......|..........|.|.............................|.................|............................................|.......
| M * SL29HO9 ...11...|........|..........|.|.............................|.................|............................................|..1....
| (qutCHDBGEAR) L * SW3OAO8 ....1...|........|..........|.|.............................|.................|............................................|.......
|-150 M * SL21DO1 ....11..|........|..........|.|.............................|.................|............................................|.......
| H SL15GO7 1....11.|....1...|..........|.|.......................1.....|.................|...............1............................|.......
|-200 M * SW17AO3 ......1.|........|..........|.|.............................|.................|............................................|.......
| HL RW27C1O ....1111|........|...11....1|.|.1111......................1.|11..1......1.....|.....11...............1...............11....|.......
|-250 H * SW3OE11 .......1|........|..........|.|.............................|.................|............................................|.......
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|-0 M * SLO8D11 ........|1.......|..........|.|.............................|.................|............................................|.......
| MLLML HM RW16G12 ........|1111....|..........|.|......1......................|.................|............................................|1.....1
|-50 H * SL19EO3 ........|.1......|..........|.|.............................|.................|............................................|.......
| H SW11DO1 ........|.11.....|.......11.|.|................1............|.................|.......................................1....|.......
|-100 H * SL16DO2 ........|..1.....|..........|.|.............................|.................|............................................|.......
| M SWO4DO8 ........|..11....|..........|.|.............................|.................|............................................|.......
|-150 benA M * SL14B12 ........|...1....|..........|.|.............................|.................|..............................1.............|.......
| benA H SL17HO1 ........|...11...|..........|.|.............................|.................|............................................|.......
| H * SW18AO2 ........|....11..|..........|.|.............................|.................|............................................|.......
|-200 M * SLO8BO9 ........|.....1..|..........|.|.............................|.................|............................................|.......
| LM RWO8EO4-d ......1.|....1111|....1.....|.|1111...1...11....1.......1...|.11.1...1........|...11.....11..............1.................|.......
| LM RWO8EO4 ......1.|....1111|....1.....|.|1111...1...11....1.......1...|.11.1...1........|...11.....11..............1.................|.......
|-250 H * SW17FO7 ........|.......1|..........|.|.............................|.................|............................................|.......
-----------------------------------------------------------------------------------------------------------------------------------
|-0 L L RWO7CO3 ........|........|1.........|.|.............................|.................|.................1..........................|.......
| M * SLO7FO9 ........|........|11........|.|.............................|.................|............................................|.......
|-50 M * SL23DO8 ........|........|.1........|.|.............................|.................|............................................|.......
| MM RL17CO1 ........|........|.11.......|.|.............................|.................|.......................................1....|.......
|-100 L * SLO6HO5 ........|........|..1.......|.|.............................|.................|............................................|.......
| MMHMH H RW23DO8 1.......|.1.1....|..111.....|.|........1....................|.................|............................................|.......
|-150 H * SW21CO6 ........|........|...1......|.|.............................|.................|............................................|.......
| MLMHHLH RL19AO6 1.......|........|...11.....|.|.............................|.................|...1........................................|.......
| M * SW18CO5 ........|........|....1.....|.|.............................|.................|............................................|.......
|-200 H * SW15BO2 ........|........|....11....|.|.............................|.................|............................................|.......
| ML RWO9DO5 ........|........|.....11...|.|.............................|.................|............................................|.......
|-250 L * SL29G1O ........|........|......1...|.|.............................|.................|............................................|.......
| M SW31CO7 ........|........|......11..|.|.............................|.................|............................................|.......
|-300 M * SL11DO7 ........|........|.......1..|.|.............................|.................|............................................|.......
| HL RW17BO9 ........|........|.......111|.|.............................|.................|............................................|.......
| M SW27AO9 ........|........|.......111|.|.............................|.................|............................................|.......
|-350 H * SL13HO8 ........|........|.........1|.|.....................1.......|.................|............................................|.......
-----------------------------------------------------------------------------------------------------------------------------------
|-0 H SW15BO6 ........|........|..........|1|.............................|.................|............................................|.......
-----------------------------------------------------------------------------------------------------------------------------------
|-0 niaD M * SW3OCO7 ........|........|..........|.|1............................|.................|............................................|.......
| niaD H SWO4H1O ........|........|..........|.|11.............1.............|.................|............................................|.......
|-50 M * SWO1G12 ........|........|..........|.|.1...........................|.................|............................................|.......
| M SW15FO5 ........|........|..........|.|.11....111...................|.................|......1.....................................|.......
|-100 L * SLO3HO2 ........|........|..........|.|..1..........................|.................|............................................|.......
| HL RW29BO6 ....1...|........|..........|.|..11.........................|..1..............|............................................|....1..
| (abaA,pCAN67) L * SLO4AO8 ........|........|..........|.|...1.........................|.................|............................................|.......
|-150 L * SW15FO6 ........|........|..........|.|...11........................|.................|............................................|.......
| bimG M SWO2BO4 ........|........|..........|.|....11.......................|.................|............................................|.......
|-200 H * SL22D12 ........|........|..........|.|.....1.......................|.................|............................................|.......
| M SW27B12 ........|........|..........|.|.....111.....................|.................|..........................................1.|.......
| L HL RL14FO3 ........|........|..........|.|......1......................|.................|1.........................................1.|.......
| M SW28CO8 ........|....1...|..........|.|......11.....................|.................|............................................|.......
| H * SLO5AO6 ........|........|..........|.|.......11....................|.................|............................................|.......
|-250 M * SLO8FO8 ........|........|..........|.|........1....................|.................|............................................|.......
| M SW24DO2 ........|........|..........|.|.......1111..................|.................|............................................|.......
|-300 L * SLO8H11 ........|........|..........|.|.........1...................|.................|............................................|.......
| L SLO6B11 ........|........|..........|.|.........11..................|.................|............................................|.......
|-350 phytochrome L * SL26B11 ........|........|..........|.|..........1..................|.................|............................................|.......
| fwA M SL22AO3 ........|........|..........|.|..........11.................|.................|............................................|.......
|-400 fwA H * SL28DO4 ........|........|..........|.|...........1.................|.................|............................................|.......
| L HM RWO7GO2 ........|........|..........|.|...........11................|.................|...............................1............|.......
|-450 (brlA) L * SWO6HO1 ........|........|..........|.|............1................|.................|............................................|.......
| L M H RL24FO1 ........|........|..........|.|............11...............|.................|....1.......................................|.......
|-500 (nudA) L * SW28BO2 ........|........|..........|.|.............1........1......|.................|............................................|.......
| HLH HMM RW19G12 ........|..11....|........1.|.|.1...........11...1.1.......1|.................|...........11...............................|.......
| H * SW12AO7 ........|........|..........|.|..............11.............|.................|............................................|.......
|-550 H * SL29E12 ........|........|..........|.|..............11.............|.................|............................................|.......
| HM RL15EO8 ........|........|..........|.|....1..........11............|.................|............................................|.......
| M * SL25GO7 ........|........|..........|.|................1............|.................|............................................|.......
|-600 M * SW24A11 ........|........|..........|.|................11...........|.................|............................................|.......
| M SL29BO9 ........|........|..........|.|.................11..........|.................|............................................|.......
|-650 ivoB M * SW28HO4 ........|........|..........|.|..................1..........|.................|............................................|.......
| H H RL23DO9 ........|........|.........1|.|1................111.........|.................|.....................11......1..............|.......
| M * SWO8AO1 ........|........|..........|.|...................1.........|.................|............................................|.......
|-700 H * SWO6DO8 ........|........|..........|.|...................11........|.................|............................................|.......
| HMMHHMM RL29GO8 ........|........|..........|.|....................11.......|.................|...........1...............................1|.......
|-750 M * SW24FO6 ........|........|..........|.|.....................1.......|.................|............................................|.......
| HL RW31GO7 ........|........|..........|.|.....................11......|.................|............................................|.......
|-800 H * SL24BO8 ........|........|..........|.|......................1......|.................|............................................|.......
| H SWO4GO6 ........|........|..........|.|......................111....|.................|............................................|.......
| M * SL24AO5 ........|........|..........|.|.......................1.....|.................|............................................|.......
|-850 oxpA M * SLO8AO1 ........|........|..........|.|.......................11....|.................|............................................|.......
| M SL29HO2 ........|........|........1.|.|........................11...|.........1.......|....1.......................................|.......
|-900 (H3,H4) H * SW23CO5 ........|........|..........|.|.........................1...|.................|............................................|.......
| H SL13FO4 ........|........|..........|.|.........................11..|.................|............................................|.......
|-950 H * SL14E12 ........|........|..........|.|..........................1..|.................|............................................|.......
| LM RL14AO2 ........|........|..........|.|..........................11.|.................|............................................|.......
| uaY H * SL17FO1 ........|........|..........|.|...........................11|.................|............................................|.......
|-1000 uaY M * SL11FO7 ........|........|..........|.|............................1|.................|............................................|.......
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|-0 M * SL22DO6 ........|........|..........|.|.............................|1................|............................................|.......
| LM RWO7DO5 ........|........|..........|.|............1................|11...............|..11........................................|.......
|-50 H * SW19A1O ........|........|..........|.|.............................|.1...............|............................................|.......
| MMH MH RW12H11 1.......|........|...1......|.|.......1...................1.|111.....1........|..........1......1.........................1|.......
|-100 M * SW1OG1O ........|........|..........|.|.............................|..1..............|............................................|..1....
| H SW14EO7 ........|........|....1.....|.|.............................|..111............|............................................|.......
|-150 aldA M * SLO9DO1 ........|........|..........|.|.............................|...1.............|............................................|.......
| aldA H SL16DO5 ........|........|....11....|.|.............................|..111............|............................................|.......
|-200 H * SW12C11 ........|........|..........|.|.............................|....11...........|............................................|.......
| ML RW21AO7 ........|........|..........|.|1............................|.....111.........|............................................|.......
|-250 L * SWO2CO2 ........|........|..........|.|.............................|......1..........|............................................|.......
| M HL RW22CO3 ........|1.......|..........|.|1............................|.....111.........|............................................|.......
|-300 M * SL17A12 ........|........|..........|.|.............................|.......1.........|............................................|.......
| L SW27DO8 ........|........|..........|.|.............................|.......11........|............................................|.......
|-350 H * SL27GO8 ........|........|..........|.|.............................|........1........|............................................|.......
| L L RL24DO9 ........|........|........11|.|.............................|........11.......|.......1........1...........................|.......
|-400 M * SWO8A1O ........|........|..........|.|.............................|.........1.......|............................................|.......
| H M RL3OD11 ........|........|..........|.|.............................|.........111.....|............................................|.......
|-450 H * SL19G11 ........|........|..........|.|.............................|..........1......|............................................|.......
| M SW24EO4 ........|........|..........|.|.............................|..........11.....|.........1..................................|.......
| L * SW14EO1 ........|........|..........|.|.............................|...........1.....|............1...............................|.......
|-500 H * SL18H1O ........|........|..........|.|.............................|...........11....|............1...............................|.......
| L MML RL18BO3 ........|........|........1.|.|.............................|.1..........11...|..................1.........................|.......
|-550 H * SLO5H12 ........|........|..........|.|.............................|.............1...|............................................|.......
| L SWO1DO6 ........|........|..........|.|.............................|.............11..|.....................1......................|.......
|-600 M * SL14E11 ........|........|..........|.|.............................|..............1..|............................................|.......
| H M RW18AO9 ........|........|..........|.|.............1.....1.........|11.....1......11.|......1........1........1...................|.......
| M * SL28G11 ........|........|..........|.|.............................|...............1.|............................................|.......
|-650 M * SL18G1O ........|........|..........|.|.............................|...............11|............................................|.......
| L SL25G12 ........|........|..........|.|.............................|................1|............................................|.......
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|-0 H SWO8C1O ........|........|..........|.|.............................|.................|111.11......................................|.......
| (spoC1) M * SL1OE1O ........|........|..........|.|.............................|.................|111.....................1...................|.......
| M * SL21D1O ........|........|..........|.|.............................|.................|.11.........................................|.......
|-50 M * SL17AO1 ........|........|..........|.|.............................|.................|..1.........................................|.......
| H SW11CO6 ........|........|..........|.|.............................|1................|1111........................................|.......
|-100 H * SL29GO5 ........|........|..........|.|.............................|.................|..11........................................|.......
| LML HL M RW26AO8 1.......|........|..1.1.....|.|.............................|.................|...11.......................................|.......
| H * SL14HO5 ........|........|..........|.|.............................|.................|....11......................................|.......
|-150 L * SW3OEO9 ........|........|..........|.|.............................|.................|.....1......................................|.......
| ML RW14AO8 ........|........|..........|.|.............................|.................|.....111....................................|.....1.
|-200 (tubA) M * SWO5BO3 ........|........|..........|.|.............................|.................|......1.....................................|.......
| L L LL RLO6HO2 ........|........|..........|.|.............................|.................|.....111....................................|.......
|-250 (riboB) M * SL13A1O ........|........|..........|.|.............................|.................|.......1....................................|.......
| ML RWO9GO6 ........|........|..........|.|.............................|.................|.......11...................................|..1....
|-300 M * SLO5D1O ........|........|..........|.|.............................|.................|........1...................................|.......
| M ML RW28CO3 1...1...|....1...|11.......1|.|..........11111..1.....1.111.|...11..1...1.....|.11...1111......1.1..1.111111...1....111....|.......
|-350 trpC M * SW22AO8 ........|........|..........|.|.............................|.................|.........1..................................|.......
| M LHL RW28E1O ........|........|..........|.|.............................|.............1...|.........11.................................|.......
|-400 M * SLO9BO1 ........|........|..........|1|.............................|.................|..........1.................................|.......
| LMM M L RW23CO9 ........|........|..........|.|.1............1..............|.................|..........111...............................|.......
|-450 M * SWO8A12 ........|........|..........|.|.............................|..1..............|...........1................................|.......
| HMM MMM RW23B12 ........|........|..........|.|.............................|.................|..........111...............................|.......
|-500 H * SWO7FO2 ........|........|.......1..|.|.............................|.................|............1...............................|.......
| M L RW29DO8 ........|.......1|.....1....|.|.............................|.................|............11.............................1|.......
|-550 M * SWO8DO2 ........|........|..........|.|.............................|.................|.............1..............................|.......
| M M LH RW21AO4 1...11..|....1...|..........|.|.11.........111..111...11.1..|....11.1...1...1.|..1...1.1111.11.........1111.1...1...111.1..|.......
| M * SL25FO1 ........|........|..........|.|.............................|.................|..............11............................|.......
| M * SWO5HO7 ........|........|..........|.|.............................|.................|...............1............................|.......
|-600 M * SW25EO3 ........|........|..........|.|.............................|.................|...............11...........................|.......
| MLH MM RWO2BO2 11......|........|..........|.|..............1...11.......1.|..1.1............|......1.........11.....................1....|.......
| L * SL27BO4 ........|........|..........|.|.............................|.................|.................1..........................|.......
|-650 M * SW11A12 ........|........|..........|.|.............................|.................|.................11.........................|.......
| M SWO3DO2 ........|........|..........|.|.............................|.................|.................111........................|.......
|-700 M * SL22DO3 ........|........|..........|.|.............................|.................|...................1........................|.......
| H SW21AO2 ........|........|..........|.|.............................|.................|...................11.......................|.......
|-750 H * SL29AO8 ........|........|..........|.|.............................|.................|....................1.......................|.......
| M SW19AO3 ........|........|..........|.|.............................|.................|....................11......................|.......
|-800 M * SL16CO8 ........|........|..........|.|.............................|.................|.....................1......................|.......
| L H RW12AO3 ........|........|......1...|.|.............................|.................|.....................11.....................|.......
| M * SL31CO9 ........|........|..........|.|.............................|.................|......................1.....................|.......
|-850 H * SW26DO5 ........|........|..........|.|.............................|.................|......................11....................|.......
| pelA L SL3OCO5 ........|........|..........|.|.............................|.................|.......................11...................|.......
|-900 M * SW12DO7 ........|........|..........|.|.............................|.................|........................1...................|.......
| MLH RLO4DO4 ........|........|..........|.|.............................|.................|........................111.................|.......
|-950 L * SW13AO5 ........|........|..........|.|.............................|.................|.........................1..................|.......
| H SW29GO6 ........|........|.....1....|.|.............................|...11......1.....|.........................11...1.............|.......
|-1000 L * SLO6H11 ........|........|..........|.|.............................|.................|..........................1.................|.......
| M L RWO5DO4 ........|..1.....|..........|.|...........1.................|.................|........................1.11................|.......
| M * SW17F12 ........|........|..........|.|.............................|.................|...........................11...............|.......
|-1050 H * SL21GO2 ........|........|..........|.|.............................|.................|...........................11...............|.......
| L SL32E1O ........|........|..........|.|.............................|.................|............................11..............|.......
|-1100 M * SWO4HO5 ........|........|..........|.|.............................|.................|.......1.....................1..............|.......
| H SW16EO1 ........|........|..........|.|.............................|.................|.............................11.............|.......
|-1150 H * SW11BO9 ........|........|..........|.|.............................|.................|..............................1.............|.......
| ML RL16AO7 ........|........|..........|.|.............................|.................|..............................11............|.......
| LH L RW19HO9 ........|........|..........|.|.............11..............|.................|......1........................11...........|.......
|-1200 (facB) M * SWO2DO8 ........|......1.|..........|.|.............................|.................|................................1...........|.......
| L SW27EO4 ........|........|..........|.|.............................|.................|................................111.........|.......
| L * SWO6FO9 ........|........|..........|.|.............................|.................|.................................1..........|.......
|-1250 M * SL31A1O ........|........|..........|.|.............................|.................|.................................11.........|.......
| HL RL27FO1 ........|........|..........|.|.............................|.................|..................................11........|.......
|-1300 (palB) L * SL26H11 ........|........|..........|.|.............................|.................|...................................1........|.......
| HL RW11CO4 ........|.1......|..........|.|.............................|.................|..................................111.......|.......
| L * SL22GO8 ........|........|..........|.|.............................|.................|....................................1.......|.......
|-1350 H * SWO3G12 ........|........|..........|.|.............................|.................|....................................11......|.......
| L SW19AO9 ........|........|..........|.|.............................|.................|....................................111.....|.......
|-1400 M * SL2OG12 ........|........|..........|.|.............................|.................|......................................1.....|.......
| M SWO4HO9 ........|........|..........|.|.............................|.................|....1.................................11....|.......
|-1450 H * SW15BO4 ........|.......1|..........|.|.............................|.................|......................1................1....|.......
| H SW21C11 ........|........|..........|.|........1....................|.................|........1..............................11...|.......
|-1500 H * SL22HO5 ........|........|..........|.|.............................|.................|........................................1...|.......
| H SL28BO6 ........|........|..........|.|.............................|.................|........................................11..|.......
|-1550 M * SW16EO8 ........|........|..........|.|.............................|.................|.........................................1..|.......
| MLMLMM L RW23FO1 ........|........|..........|.|.............................|.................|.........................................11.|.......
| LMHM HML RWO7A1O ..1.....|........|..........|.|..1..........................|.................|..........................................1.|.......
| MHML LL RW15HO9 ........|........|..........|.|.............................|.................|.........................................111|.......
|-1600 M * SW15CO7 ........|........|..........|.|.............................|.................|...........1...............................1|.......
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|-0 H * SLO6GO5 ........|........|..........|.|.............................|.................|............................................|1......
| MHM L RLO5BO7 ........|1.......|....1....1|.|........................11...|.......1.........|............................................|11.....
| M * SLO5HO7 ........|........|..........|.|..............1..............|..1..............|............................................|.11....
|-50 H * SL32DO1 ........|........|..........|.|.............................|.................|............................................|..1....
| L SWO1FO3 ........|........|..........|.|.............................|.................|............................................|..11...
|-100 M * SL16E1O ........|........|..........|.|.............................|.................|............................................|...1...
| M HM RL31GO8 ........|........|..........|.|......11................1....|.......11........|1.........1......1............11..........1.|11111.1
|-150 M * SLO9C11 ........|........|..........|.|.............................|.................|............................................|....1..
| M SL13HO9 ........|........|..........|.|.............................|.................|............................................|....11.
|-200 H * SL15AO6 ........|........|..........|.|.............................|.................|............................................|.....1.
| M MHL RW14GO6 ........|........|..........|.|...............11............|.................|............................................|.....11
|-250 phytochrome,(nirA) L * SL12CO5 ........|........|..........|.|.............................|.................|............................................|......1
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In the first column a scale in kilobases (kb) is provided for the chromosome walk. The chromosome walk above is aligned with the genetic map.
In the second column Genetic loci assigned to cosmids are found. Cosmids, which hybridize to another complementing
clone or to a clone, which hybridizes to a gene probe, are given in parantheses. The parantheses
around the locus name implies that the cosmid listed by name in the same row has not been
shown to complement directly a mutation at the genetic locus or hybridize directly to a gene probe.
CEN denotes the predicted location of the centromere, while cen in lowercase denotes a centromeric repeat.
In the third column hybridization of the clone to each chromosome is scored as high (H), medium (M), or low (L).
In the fourth column the star (*) denotes that the cosmid was used as a probe.
In the fifth column is the clone name.
NOTES ON THE PHYSICAL MAP:
4 breaks were introduced into the physical map to align the physical and genetic maps.